Solyc01g102810.3.1

Description : Protein STICHEL OS=Arabidopsis thaliana (sp|o64728|sti_arath : 1102.0)

Gene families : OG0000633 (Archaeplastida) Phylogenetic Tree(s): OG0000633_tree ,
OG_05_0000427 (LandPlants) Phylogenetic Tree(s): OG_05_0000427_tree ,
OG_06_0001603 (SeedPlants) Phylogenetic Tree(s): OG_06_0001603_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g102810.3.1
Cluster	HCCA: Cluster_236

Target	Alias	Description	ECC score	Gene Family Method
AT1G14460	No alias	AAA-type ATPase family protein	0.06	Archaeplastida
AT2G02480	STI	AAA-type ATPase family protein	0.03	Archaeplastida
GSVIVT01021264001	No alias	Protein STICHEL-like 3 OS=Arabidopsis thaliana	0.08	Archaeplastida
GSVIVT01023130001	No alias	Protein STICHEL OS=Arabidopsis thaliana	0.03	Archaeplastida
Gb_11110	No alias	Protein STICHEL-like 3 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Gb_11323	No alias	Protein STICHEL OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os01g53070.1	No alias	Protein STICHEL-like 3 OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os11g13990.1	No alias	Protein STICHEL OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os12g10670.1	No alias	Protein STICHEL OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os12g19180.1	No alias	Protein STICHEL-like 2 OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_10436210g0020	No alias	Protein STICHEL OS=Arabidopsis thaliana...	0.05	Archaeplastida
Pp3c9_18380V3.1	No alias	AAA-type ATPase family protein	0.02	Archaeplastida
Zm00001e007784_P001	No alias	Protein STICHEL-like 2 OS=Arabidopsis thaliana...	0.07	Archaeplastida
Zm00001e019639_P005	No alias	Protein STICHEL OS=Arabidopsis thaliana...	0.07	Archaeplastida
Zm00001e019906_P002	No alias	Protein STICHEL-like 3 OS=Arabidopsis thaliana...	0.08	Archaeplastida
Zm00001e021817_P001	No alias	No annotation	0.04	Archaeplastida
Zm00001e028231_P002	No alias	Protein STICHEL-like 3 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Zm00001e032180_P001	No alias	Protein STICHEL-like 3 OS=Arabidopsis thaliana...	0.08	Archaeplastida
Zm00001e039775_P001	No alias	Protein STICHEL OS=Arabidopsis thaliana...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003887	DNA-directed DNA polymerase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
MF	GO:0034061	DNA polymerase activity	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Neighborhood
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
CC	GO:0005856	cytoskeleton	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006996	organelle organization	IEP	Neighborhood
BP	GO:0007010	cytoskeleton organization	IEP	Neighborhood
MF	GO:0008017	microtubule binding	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0015631	tubulin binding	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0019208	phosphatase regulator activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0019888	protein phosphatase regulator activity	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
CC	GO:1903293	phosphatase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR022754	DNA_pol_III_gamma-3	722	847

External Links

No external refs found!

Solyc01g102810.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation