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  5. Solyc01g102930.1.1

Solyc01g102930.1.1


Description : no description available(sp|f4jt78|rpp2a_arath : 145.0)


Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000077 (LandPlants) Phylogenetic Tree(s): OG_05_0000077_tree ,
OG_06_0012549 (SeedPlants) Phylogenetic Tree(s): OG_06_0012549_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g102930.1.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00052p00159030 evm_27.TU.AmTr_v1... Probable disease resistance protein RPP1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00109p00126580 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.01 Archaeplastida
AT1G61105 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.01 Archaeplastida
AT1G63730 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT2G14080 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT5G40910 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT5G46470 RPS6 disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT5G46490 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
GSVIVT01029013001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.01 Archaeplastida
GSVIVT01036408001 No alias External stimuli response.biotic stress.pathogen... 0.01 Archaeplastida
Gb_26262 No alias effector receptor (NLR) 0.02 Archaeplastida
Gb_33284 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc11g011350.3.1 No alias effector receptor (NLR) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 292 313
No external refs found!