Solyc01g103370.3.1

Description : D-class RAB GTPase

Gene families : OG0001076 (Archaeplastida) Phylogenetic Tree(s): OG0001076_tree ,
OG_05_0001162 (LandPlants) Phylogenetic Tree(s): OG_05_0001162_tree ,
OG_06_0001063 (SeedPlants) Phylogenetic Tree(s): OG_06_0001063_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g103370.3.1
Cluster	HCCA: Cluster_60

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000455.19	No alias	Ras-related protein RABD2c OS=Arabidopsis thaliana	0.01	Archaeplastida
Cpa\|evm.model.tig00001408.10	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.02	Archaeplastida
Cre12.g560150	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.02	Archaeplastida
GSVIVT01013868001	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.09	Archaeplastida
LOC_Os01g08450.1	No alias	D-class RAB GTPase	0.02	Archaeplastida
LOC_Os01g37800.1	No alias	D-class RAB GTPase	0.04	Archaeplastida
MA_34669g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Smo228158	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.01	Archaeplastida
Zm00001e015303_P001	No alias	D-class RAB GTPase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0007034	vacuolar transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	10	170

External Links

No external refs found!