Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.96
Description : RNA processing.RNA modification.mRNA methylation.HAKAI E3 ubiquitin ligase
Gene families : OG0006398 (Archaeplastida) Phylogenetic Tree(s): OG0006398_tree ,
OG_05_0005512 (LandPlants) Phylogenetic Tree(s): OG_05_0005512_tree ,
OG_06_0006549 (SeedPlants) Phylogenetic Tree(s): OG_06_0006549_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00022p00108690 | |
Cluster | HCCA: Cluster_27 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GSVIVT01034021001 | No alias | RNA processing.RNA modification.mRNA methylation.HAKAI... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003779 | actin binding | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
CC | GO:0005669 | transcription factor TFIID complex | IEP | Neighborhood |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
BP | GO:0006650 | glycerophospholipid metabolic process | IEP | Neighborhood |
BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Neighborhood |
BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
BP | GO:0009725 | response to hormone | IEP | Neighborhood |
BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
BP | GO:0016053 | organic acid biosynthetic process | IEP | Neighborhood |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Neighborhood |
BP | GO:0042221 | response to chemical | IEP | Neighborhood |
BP | GO:0044283 | small molecule biosynthetic process | IEP | Neighborhood |
CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Neighborhood |
BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Neighborhood |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |