Description : No annotation
Gene families : OG0006937 (Archaeplastida) Phylogenetic Tree(s): OG0006937_tree ,
OG_05_0006916 (LandPlants) Phylogenetic Tree(s): OG_05_0006916_tree ,
OG_06_0007531 (SeedPlants) Phylogenetic Tree(s): OG_06_0007531_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc01g104460.4.1 | |
Cluster | HCCA: Cluster_283 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00001424.6 | No alias | RNA processing.RNA quality control Exon Junction complex... | 0.02 | Archaeplastida | |
GSVIVT01023017001 | No alias | RNA processing.RNA quality control Exon Junction complex... | 0.03 | Archaeplastida | |
Mp1g23500.1 | No alias | component PYM of RNA quality control Exon Junction complex | 0.02 | Archaeplastida | |
Zm00001e001129_P001 | No alias | component PYM of RNA quality control Exon Junction complex | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000347 | THO complex | IEP | Neighborhood |
BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | Neighborhood |
CC | GO:0000445 | THO complex part of transcription export complex | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003729 | mRNA binding | IEP | Neighborhood |
MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
CC | GO:0005685 | U1 snRNP | IEP | Neighborhood |
BP | GO:0006376 | mRNA splice site selection | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006413 | translational initiation | IEP | Neighborhood |
BP | GO:0006457 | protein folding | IEP | Neighborhood |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
CC | GO:0016272 | prefoldin complex | IEP | Neighborhood |
MF | GO:0019208 | phosphatase regulator activity | IEP | Neighborhood |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | Neighborhood |
BP | GO:0022607 | cellular component assembly | IEP | Neighborhood |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Neighborhood |
CC | GO:0030289 | protein phosphatase 4 complex | IEP | Neighborhood |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Neighborhood |
CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
CC | GO:0035145 | exon-exon junction complex | IEP | Neighborhood |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Neighborhood |
CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044428 | nuclear part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
BP | GO:0065003 | protein-containing complex assembly | IEP | Neighborhood |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Neighborhood |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | Neighborhood |
CC | GO:0120114 | Sm-like protein family complex | IEP | Neighborhood |
CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |