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  5. Solyc01g104670.3.1

Solyc01g104670.3.1


Description : transcription factor (TUB)


Gene families : OG0000335 (Archaeplastida) Phylogenetic Tree(s): OG0000335_tree ,
OG_05_0000295 (LandPlants) Phylogenetic Tree(s): OG_05_0000295_tree ,
OG_06_0000341 (SeedPlants) Phylogenetic Tree(s): OG_06_0000341_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g104670.3.1
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01029701001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.08 Archaeplastida
GSVIVT01034528001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.04 Archaeplastida
LOC_Os01g64700.2 No alias transcription factor (TUB) 0.05 Archaeplastida
LOC_Os05g43850.1 No alias transcription factor (TUB) 0.03 Archaeplastida
Zm00001e019166_P001 No alias transcription factor (TUB) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
InterPro domains Description Start Stop
IPR000007 Tubby_C 116 422
IPR001810 F-box_dom 52 105
No external refs found!