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  4. Sequence
  5. Solyc01g104950.4.1

Solyc01g104950.4.1


Description : no hits & (original description: none)


Gene families : OG0000435 (Archaeplastida) Phylogenetic Tree(s): OG0000435_tree ,
OG_05_0000257 (LandPlants) Phylogenetic Tree(s): OG_05_0000257_tree ,
OG_06_0085139 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g104950.4.1
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00246460 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
LOC_Os01g19220.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
LOC_Os04g54810.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
MA_102349g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
MA_182289g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_791061g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
Mp2g08000.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.05 Archaeplastida
Smo112087 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
Smo419541 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
Solyc01g079570.3.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
Zm00001e041753_P002 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!