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  5. Solyc01g105120.4.1

Solyc01g105120.4.1


Description : LNK circadian clock transcriptional co-activator


Gene families : OG0001777 (Archaeplastida) Phylogenetic Tree(s): OG0001777_tree ,
OG_05_0001310 (LandPlants) Phylogenetic Tree(s): OG_05_0001310_tree ,
OG_06_0004326 (SeedPlants) Phylogenetic Tree(s): OG_06_0004326_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g105120.4.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00159320 evm_27.TU.AmTr_v1... No description available 0.1 Archaeplastida
AT3G12320 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.16 Archaeplastida
AT3G54500 No alias BEST Arabidopsis thaliana protein match is: dentin... 0.06 Archaeplastida
AT5G06980 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 Archaeplastida
AT5G64170 No alias dentin sialophosphoprotein-related 0.1 Archaeplastida
GSVIVT01003080001 No alias Protein LNK1 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01003081001 No alias Multi-process regulation.circadian clock.evening element... 0.08 Archaeplastida
GSVIVT01036604001 No alias No description available 0.09 Archaeplastida
Gb_36250 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g17396.2 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os01g31360.2 No alias LNK circadian clock transcriptional co-activator 0.04 Archaeplastida
LOC_Os03g27019.1 No alias LNK circadian clock transcriptional co-activator 0.04 Archaeplastida
Pp3c13_6620V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c3_2690V3.1 No alias No annotation 0.04 Archaeplastida
Smo417164 No alias No description available 0.06 Archaeplastida
Smo440439 No alias Multi-process regulation.circadian clock.evening element... 0.03 Archaeplastida
Zm00001e001871_P006 No alias LNK circadian clock transcriptional co-activator 0.1 Archaeplastida
Zm00001e025468_P002 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e037970_P002 No alias LNK circadian clock transcriptional co-activator 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!