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  5. Solyc01g105320.4.1

Solyc01g105320.4.1


Description : MCP1 programmed cell death metacaspase-like regulator


Gene families : OG0000779 (Archaeplastida) Phylogenetic Tree(s): OG0000779_tree ,
OG_05_0001042 (LandPlants) Phylogenetic Tree(s): OG_05_0001042_tree ,
OG_06_0000767 (SeedPlants) Phylogenetic Tree(s): OG_06_0000767_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g105320.4.1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00201610 evm_27.TU.AmTr_v1... Multi-process regulation.programmed cell death.MCP1... 0.03 Archaeplastida
AT5G64240 AtMC3, MC3 metacaspase 3 0.04 Archaeplastida
GSVIVT01015724001 No alias Multi-process regulation.programmed cell death.MCP1... 0.15 Archaeplastida
Pp3c24_11630V3.1 No alias metacaspase 1 0.02 Archaeplastida
Zm00001e001879_P002 No alias MCP1 programmed cell death metacaspase-like regulator 0.06 Archaeplastida
Zm00001e037975_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e037976_P001 No alias MCP1 programmed cell death metacaspase-like regulator 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!