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Description : Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana (sp|q9lme6|mbd8_arath : 109.0)
Gene families : OG0004509 (Archaeplastida) Phylogenetic Tree(s): OG0004509_tree ,
OG_05_0003280 (LandPlants) Phylogenetic Tree(s): OG_05_0003280_tree ,
OG_06_0002357 (SeedPlants) Phylogenetic Tree(s): OG_06_0002357_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g105330.3.1 | |
| Cluster | HCCA: Cluster_202 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01009040001 | No alias | Methyl-CpG-binding domain-containing protein 8... | 0.04 | Archaeplastida | |
| LOC_Os08g37904.2 | No alias | Methyl-CpG-binding domain-containing protein 8... | 0.03 | Archaeplastida | |
| LOC_Os08g37920.1 | No alias | Methyl-CpG-binding domain-containing protein 8... | 0.03 | Archaeplastida | |
| LOC_Os09g29750.1 | No alias | Methyl-CpG-binding domain-containing protein 8... | 0.03 | Archaeplastida | |
| MA_6549595g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Mp1g01900.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Zm00001e003405_P001 | No alias | Methyl-CpG-binding domain-containing protein 8... | 0.08 | Archaeplastida | |
| Zm00001e010007_P001 | No alias | Methyl-CpG-binding domain-containing protein 8... | 0.07 | Archaeplastida | |
| Zm00001e024319_P003 | No alias | Methyl-CpG-binding domain-containing protein 8... | 0.09 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
| MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
| MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005525 | GTP binding | IEP | Neighborhood |
| CC | GO:0005681 | spliceosomal complex | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016458 | gene silencing | IEP | Neighborhood |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
| MF | GO:0017025 | TBP-class protein binding | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
| MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |