Solyc01g105500.4.1


Description : no description available(sp|a0a1p8b8f8|xyn5_arath : 393.0)


Gene families : OG0001243 (Archaeplastida) Phylogenetic Tree(s): OG0001243_tree ,
OG_05_0000962 (LandPlants) Phylogenetic Tree(s): OG_05_0000962_tree ,
OG_06_0002114 (SeedPlants) Phylogenetic Tree(s): OG_06_0002114_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g105500.4.1
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AT2G14690 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
AT4G33820 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
GSVIVT01037825001 No alias No description available 0.03 Archaeplastida
GSVIVT01037832001 No alias No description available 0.03 Archaeplastida
LOC_Os03g10478.1 No alias no description available(sp|q84wt5|xyn5l_arath : 394.0) 0.02 Archaeplastida
Solyc01g107000.3.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e001013_P003 No alias no description available(sp|q84wt5|xyn5l_arath : 305.0) 0.02 Archaeplastida
Zm00001e038773_P006 No alias no description available(sp|q84wt5|xyn5l_arath : 388.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
MF GO:0016151 nickel cation binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR003305 CenC_carb-bd 50 165
IPR001000 GH10 228 483
No external refs found!