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  5. Solyc01g105680.4.1

Solyc01g105680.4.1


Description : component NPH3 of CUL3-BTB E3 ubiquitin ligase complex


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0003027 (LandPlants) Phylogenetic Tree(s): OG_05_0003027_tree ,
OG_06_0007222 (SeedPlants) Phylogenetic Tree(s): OG_06_0007222_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g105680.4.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00262560 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g48800... 0.05 Archaeplastida
AMTR_s00049p00216130 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g67900... 0.02 Archaeplastida
AMTR_s00088p00177890 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g48130... 0.07 Archaeplastida
AT3G19850 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT3G44820 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT4G31820 MAB4, NPY1, ENP Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT5G64330 RPT3, NPH3, JK218 Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
GSVIVT01000400001 No alias BTB/POZ domain-containing protein At3g22104... 0.04 Archaeplastida
GSVIVT01010983001 No alias BTB/POZ domain-containing protein At1g03010... 0.02 Archaeplastida
GSVIVT01024541001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01030043001 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
Gb_16354 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g38120.1 No alias BTB/POZ domain-containing protein At1g67900... 0.04 Archaeplastida
LOC_Os09g09370.2 No alias BTB/POZ domain-containing protein At5g47800... 0.04 Archaeplastida
MA_842546g0010 No alias BTB/POZ domain-containing protein At5g48800... 0.02 Archaeplastida
Pp3c13_13210V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Pp3c6_24130V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Zm00001e011959_P001 No alias BTB/POZ domain-containing protein At5g66560... 0.02 Archaeplastida
Zm00001e033674_P003 No alias BTB/POZ domain-containing protein At5g47800... 0.03 Archaeplastida
Zm00001e038209_P001 No alias BTB/POZ domain-containing protein At1g03010... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901642 nucleoside transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR027356 NPH3_dom 228 516
IPR000210 BTB/POZ_dom 46 131
No external refs found!