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  5. AMTR_s00022p00124760

AMTR_s00022p00124760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.117

Description : Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin transporter (PILS-type)


Gene families : OG0000471 (Archaeplastida) Phylogenetic Tree(s): OG0000471_tree ,
OG_05_0000865 (LandPlants) Phylogenetic Tree(s): OG_05_0000865_tree ,
OG_06_0004620 (SeedPlants) Phylogenetic Tree(s): OG_06_0004620_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00124760
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AT5G65980 No alias Auxin efflux carrier family protein 0.02 Archaeplastida
Mp2g19270.1 No alias auxin efflux transporter (PILS). auxin transporter (PILS) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0030288 outer membrane-bounded periplasmic space IEP Neighborhood
CC GO:0042597 periplasmic space IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004776 Mem_trans 11 248
No external refs found!