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  5. Solyc01g106460.4.1

Solyc01g106460.4.1


Description : transcription factor (bHLH). bHLH-IVa-class iron homeostasis regulator


Gene families : OG0001334 (Archaeplastida) Phylogenetic Tree(s): OG0001334_tree ,
OG_05_0001220 (LandPlants) Phylogenetic Tree(s): OG_05_0001220_tree ,
OG_06_0002606 (SeedPlants) Phylogenetic Tree(s): OG_06_0002606_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g106460.4.1
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AT2G22760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT2G22770 NAI1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
GSVIVT01002833001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
GSVIVT01003697001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01003701001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01006588001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01036959001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Gb_10697 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_13728 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.02 Archaeplastida
LOC_Os12g43620.1 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.03 Archaeplastida
Zm00001e002570_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e005177_P001 No alias No annotation 0.04 Archaeplastida
Zm00001e005179_P001 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.04 Archaeplastida
Zm00001e012122_P001 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 63 110
No external refs found!