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  5. Solyc01g106980.2.1

Solyc01g106980.2.1


Description : No annotation


Gene families : OG0001243 (Archaeplastida) Phylogenetic Tree(s): OG0001243_tree ,
OG_05_0000962 (LandPlants) Phylogenetic Tree(s): OG_05_0000962_tree ,
OG_06_0002114 (SeedPlants) Phylogenetic Tree(s): OG_06_0002114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g106980.2.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g10469.1 No alias no description available(sp|q680b7|xyn4_arath : 358.0) 0.03 Archaeplastida
LOC_Os03g14010.1 No alias no description available(sp|q84wt5|xyn5l_arath : 305.0) 0.02 Archaeplastida
LOC_Os10g21110.1 No alias no description available(sp|q680b7|xyn4_arath : 358.0) 0.02 Archaeplastida
MA_604666g0010 No alias No annotation 0.04 Archaeplastida
Solyc01g111340.4.1 No alias no description available(sp|a0a1p8b8f8|xyn5_arath : 307.0) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
MF GO:0098599 palmitoyl hydrolase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!