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  5. Solyc01g107190.3.1

Solyc01g107190.3.1


Description : transcription factor (AS2/LOB)


Gene families : OG0000724 (Archaeplastida) Phylogenetic Tree(s): OG0000724_tree ,
OG_05_0000483 (LandPlants) Phylogenetic Tree(s): OG_05_0000483_tree ,
OG_06_0000437 (SeedPlants) Phylogenetic Tree(s): OG_06_0000437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g107190.3.1
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00051070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
GSVIVT01009360001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
LOC_Os03g33090.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
LOC_Os03g41330.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_73565g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Smo105005 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
Solyc05g009320.4.1 No alias transcription factor (AS2/LOB) 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 2 101
No external refs found!