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  5. Solyc01g107370.3.1

Solyc01g107370.3.1


Description : GASA precursor polypeptide


Gene families : OG0000833 (Archaeplastida) Phylogenetic Tree(s): OG0000833_tree ,
OG_05_0000496 (LandPlants) Phylogenetic Tree(s): OG_05_0000496_tree ,
OG_06_0001491 (SeedPlants) Phylogenetic Tree(s): OG_06_0001491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g107370.3.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273070 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.03 Archaeplastida
GSVIVT01033563001 No alias Phytohormones.signalling peptides.CRP... 0.09 Archaeplastida
MA_132217g0010 No alias GASA precursor polypeptide 0.02 Archaeplastida
Smo115445 No alias Phytohormones.signalling peptides.CRP... 0.03 Archaeplastida
Smo440818 No alias Phytohormones.signalling peptides.CRP... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003854 GASA 31 89
No external refs found!