1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g107490.2.1

Solyc01g107490.2.1


Description : transcription factor (bHLH)


Gene families : OG0000624 (Archaeplastida) Phylogenetic Tree(s): OG0000624_tree ,
OG_05_0000347 (LandPlants) Phylogenetic Tree(s): OG_05_0000347_tree ,
OG_06_0000255 (SeedPlants) Phylogenetic Tree(s): OG_06_0000255_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g107490.2.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AT1G05710 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT1G31050 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT1G49830 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
AT2G20100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
GSVIVT01009761001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.07 Archaeplastida
GSVIVT01015353001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Gb_06063 No alias transcription factor (bHLH) 0.04 Archaeplastida
Gb_33415 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os03g55220.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os05g14010.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Mp2g19970.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Smo117274 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc07g063830.3.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc10g006640.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e005748_P002 No alias transcription factor (bHLH) 0.08 Archaeplastida
Zm00001e010350_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e016395_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e019609_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e034854_P002 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e039938_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!