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  4. Sequence
  5. Solyc01g107710.2.1

Solyc01g107710.2.1


Description : no hits & (original description: none)


Gene families : OG0000287 (Archaeplastida) Phylogenetic Tree(s): OG0000287_tree ,
OG_05_0000195 (LandPlants) Phylogenetic Tree(s): OG_05_0000195_tree ,
OG_06_0000511 (SeedPlants) Phylogenetic Tree(s): OG_06_0000511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g107710.2.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00178790 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00002p00212250 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00003p00264210 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00040p00170390 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00171p00044550 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00175p00033590 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G54890 No alias Late embryogenesis abundant (LEA) protein-related 0.06 Archaeplastida
AT3G19430 No alias late embryogenesis abundant protein-related / LEA protein-related 0.06 Archaeplastida
AT4G27400 No alias Late embryogenesis abundant (LEA) protein-related 0.15 Archaeplastida
AT5G54370 No alias Late embryogenesis abundant (LEA) protein-related 0.11 Archaeplastida
AT5G60520 No alias Late embryogenesis abundant (LEA) protein-related 0.04 Archaeplastida
AT5G60530 No alias late embryogenesis abundant protein-related / LEA protein-related 0.11 Archaeplastida
GSVIVT01005845001 No alias No description available 0.03 Archaeplastida
GSVIVT01034762001 No alias No description available 0.03 Archaeplastida
Gb_08582 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_15126 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_38738 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g73700.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os01g73710.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os01g73720.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os01g73730.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os05g01680.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g47940.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os11g05360.1 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_558137g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6494080g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
MA_6640022g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_6771381g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_74876g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_7605738g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8427244g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8955g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
MA_957739g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Mp1g03490.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c20_18650V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.04 Archaeplastida
Pp3s49_30V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.02 Archaeplastida
Solyc02g078930.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e002062_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e018525_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e018526_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e018527_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e021386_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e024129_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e028269_P001 No alias no hits & (original description: none) 0.11 Archaeplastida
Zm00001e029686_P001 No alias no hits & (original description: none) 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR009646 Root_cap 313 369
No external refs found!