- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : transcription factor (bHLH)
Gene families : OG0001706 (Archaeplastida) Phylogenetic Tree(s): OG0001706_tree ,
OG_05_0001095 (LandPlants) Phylogenetic Tree(s): OG_05_0001095_tree ,
OG_06_0001642 (SeedPlants) Phylogenetic Tree(s): OG_06_0001642_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g107950.2.1 | |
| Cluster | HCCA: Cluster_17 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G49770 | ZOU, RGE1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | Archaeplastida | |
| GSVIVT01031718001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.05 | Archaeplastida | |
| LOC_Os02g34320.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| LOC_Os04g35000.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| LOC_Os04g35010.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Pp3c13_2080V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Pp3c1_8930V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Pp3c26_15000V3.1 | No alias | ABA-inducible BHLH-type transcription factor | 0.02 | Archaeplastida | |
| Pp3c3_810V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| Smo413316 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | Archaeplastida | |
| Smo421249 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| Solyc01g014910.2.1 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| Zm00001e008118_P002 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e029250_P001 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000228 | nuclear chromosome | IEP | Neighborhood |
| MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
| CC | GO:0005694 | chromosome | IEP | Neighborhood |
| BP | GO:0006338 | chromatin remodeling | IEP | Neighborhood |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
| MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
| CC | GO:0031011 | Ino80 complex | IEP | Neighborhood |
| CC | GO:0033202 | DNA helicase complex | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044454 | nuclear chromosome part | IEP | Neighborhood |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Neighborhood |
| CC | GO:0097346 | INO80-type complex | IEP | Neighborhood |
| CC | GO:1904949 | ATPase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 103 | 146 |
| No external refs found! |