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  5. Solyc01g108130.4.1

Solyc01g108130.4.1


Description : transcription factor (REM)


Gene families : OG0000741 (Archaeplastida) Phylogenetic Tree(s): OG0000741_tree ,
OG_05_0001199 (LandPlants) Phylogenetic Tree(s): OG_05_0001199_tree ,
OG_06_0001296 (SeedPlants) Phylogenetic Tree(s): OG_06_0001296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g108130.4.1
Cluster HCCA: Cluster_258

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g08620.1 No alias transcription factor (REM) 0.02 Archaeplastida
LOC_Os11g09160.1 No alias transcription factor (REM) 0.03 Archaeplastida
Pp3c22_2550V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
Solyc04g079130.2.1 No alias transcription factor (REM) 0.03 Archaeplastida
Solyc06g034140.3.1 No alias transcription factor (REM) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 127 216
No external refs found!