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  5. Solyc01g108160.3.1

Solyc01g108160.3.1


Description : component ATG2 of autophagosome ATG9-2-18 membrane shuttling complex


Gene families : OG0005528 (Archaeplastida) Phylogenetic Tree(s): OG0005528_tree ,
OG_05_0004882 (LandPlants) Phylogenetic Tree(s): OG_05_0004882_tree ,
OG_06_0006196 (SeedPlants) Phylogenetic Tree(s): OG_06_0006196_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g108160.3.1
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00106330 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 Archaeplastida
Cre09.g408950 No alias No description available 0.04 Archaeplastida
Gb_39311 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 Archaeplastida
LOC_Os06g15700.1 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.08 Archaeplastida
MA_10433793g0030 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 Archaeplastida
Zm00001e030944_P001 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 Archaeplastida
Zm00001e036789_P001 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR026854 VPS13_N 18 110
IPR015412 Autophagy-rel_C 1878 1972
No external refs found!