Solyc01g108410.3.1

Description : Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana (sp|q9fix3|pp407_arath : 787.0)

Gene families : OG0008008 (Archaeplastida) Phylogenetic Tree(s): OG0008008_tree ,
OG_05_0004984 (LandPlants) Phylogenetic Tree(s): OG_05_0004984_tree ,
OG_06_0001824 (SeedPlants) Phylogenetic Tree(s): OG_06_0001824_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g108410.3.1
Cluster	HCCA: Cluster_146

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
BP	GO:0016197	endosomal transport	IEP	Neighborhood
CC	GO:0016459	myosin complex	IEP	Neighborhood
BP	GO:0016482	cytosolic transport	IEP	Neighborhood
CC	GO:0030906	retromer, cargo-selective complex	IEP	Neighborhood
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Neighborhood
CC	GO:0044430	cytoskeletal part	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	386	418
IPR002885	Pentatricopeptide_repeat	425	474
IPR002885	Pentatricopeptide_repeat	320	369
IPR002885	Pentatricopeptide_repeat	565	612
IPR002885	Pentatricopeptide_repeat	495	543
IPR002885	Pentatricopeptide_repeat	179	228
IPR002885	Pentatricopeptide_repeat	250	291
IPR002885	Pentatricopeptide_repeat	623	645

External Links

No external refs found!