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  5. Solyc01g108900.4.1

Solyc01g108900.4.1


Description : LRR-domain extensin


Gene families : OG0000279 (Archaeplastida) Phylogenetic Tree(s): OG0000279_tree ,
OG_05_0000206 (LandPlants) Phylogenetic Tree(s): OG_05_0000206_tree ,
OG_06_0000158 (SeedPlants) Phylogenetic Tree(s): OG_06_0000158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g108900.4.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00242570 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.05 Archaeplastida
AMTR_s00029p00242610 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.03 Archaeplastida
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.04 Archaeplastida
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.06 Archaeplastida
AT2G15880 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT3G19020 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.08 Archaeplastida
AT5G25550 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.08 Archaeplastida
Gb_26318 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os01g25460.1 No alias LRR-domain extensin 0.06 Archaeplastida
LOC_Os04g42620.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os12g35710.1 No alias LRR-domain extensin 0.04 Archaeplastida
Pp3c1_10970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
Pp3c4_3520V3.1 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 68 102
No external refs found!