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  5. Solyc01g109180.4.1

Solyc01g109180.4.1


Description : Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana (sp|q9xia9|lacs2_arath : 984.0) & Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond(50.6.2 : 432.2)


Gene families : OG0000625 (Archaeplastida) Phylogenetic Tree(s): OG0000625_tree ,
OG_05_0001883 (LandPlants) Phylogenetic Tree(s): OG_05_0001883_tree ,
OG_06_0001731 (SeedPlants) Phylogenetic Tree(s): OG_06_0001731_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g109180.4.1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00117760 evm_27.TU.AmTr_v1... Enzyme classification.EC_6 ligases.EC_6.2 ligase forming... 0.02 Archaeplastida
AT1G49430 LRD2, LACS2 long-chain acyl-CoA synthetase 2 0.22 Archaeplastida
AT2G47240 CER8, LACS1 AMP-dependent synthetase and ligase family protein 0.09 Archaeplastida
Cre03.g182050 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01028155001 No alias Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01031892001 No alias Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_09959 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Gb_18621 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_21648 No alias peroxisomal long-chain acyl-CoA synthetase 0.03 Archaeplastida
Gb_32132 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os01g48910.2 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os05g04170.1 No alias Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g35400.1 No alias Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_10432761g0010 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_839621g0010 No alias Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Mp8g16310.1 No alias peroxisomal long-chain acyl-CoA synthetase 0.04 Archaeplastida
Pp3c12_20700V3.1 No alias AMP-dependent synthetase and ligase family protein 0.05 Archaeplastida
Pp3c18_21060V3.1 No alias long-chain acyl-CoA synthetase 7 0.02 Archaeplastida
Solyc09g075770.3.1 No alias peroxisomal long-chain acyl-CoA synthetase 0.05 Archaeplastida
Zm00001e024608_P001 No alias Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.12 Archaeplastida
Zm00001e040332_P001 No alias Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 58 521
No external refs found!