Description : transcription factor (mTERF)
Gene families : OG0001159 (Archaeplastida) Phylogenetic Tree(s): OG0001159_tree ,
OG_05_0008403 (LandPlants) Phylogenetic Tree(s): OG_05_0008403_tree ,
OG_06_0009405 (SeedPlants) Phylogenetic Tree(s): OG_06_0009405_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc01g109630.4.1 | |
Cluster | HCCA: Cluster_211 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G21710 | EMB2219 | Mitochondrial transcription termination factor family protein | 0.06 | Archaeplastida | |
GSVIVT01011061001 | No alias | RNA processing.organelle machineries.RNA... | 0.04 | Archaeplastida | |
GSVIVT01031970001 | No alias | RNA biosynthesis.organelle... | 0.07 | Archaeplastida | |
LOC_Os05g33500.1 | No alias | transcription factor (mTERF). mTERF4 plastidial RNA... | 0.03 | Archaeplastida | |
LOC_Os07g04230.1 | No alias | transcription factor (mTERF) | 0.03 | Archaeplastida | |
MA_15876g0010 | No alias | transcription factor (mTERF). mTERF4 plastidial RNA... | 0.02 | Archaeplastida | |
Mp1g22560.1 | No alias | transcription factor (mTERF) | 0.03 | Archaeplastida | |
Pp3c14_12200V3.1 | No alias | Mitochondrial transcription termination factor family protein | 0.04 | Archaeplastida | |
Pp3c3_15310V3.1 | No alias | Mitochondrial transcription termination factor family protein | 0.03 | Archaeplastida | |
Zm00001e027106_P001 | No alias | transcription factor (mTERF). mTERF4 plastidial RNA... | 0.07 | Archaeplastida | |
Zm00001e032771_P001 | No alias | transcription factor (mTERF) | 0.06 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
MF | GO:0005525 | GTP binding | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
MF | GO:0050662 | coenzyme binding | IEP | Neighborhood |
No external refs found! |