Description : pectin methylesterase
Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0000108 (LandPlants) Phylogenetic Tree(s): OG_05_0000108_tree ,
OG_06_0004723 (SeedPlants) Phylogenetic Tree(s): OG_06_0004723_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc01g109740.3.1 | |
Cluster | HCCA: Cluster_78 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00007p00264370 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
AMTR_s00027p00247950 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00106p00092510 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AMTR_s00123p00050980 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AT1G11370 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
AT2G21610 | ATPE11, PE11 | pectinesterase 11 | 0.09 | Archaeplastida | |
AT2G36710 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
AT5G19730 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT5G26810 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
GSVIVT01013832001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.01 | Archaeplastida | |
GSVIVT01014641001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01015022001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01015290001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
GSVIVT01031250001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.06 | Archaeplastida | |
GSVIVT01034985001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.06 | Archaeplastida | |
Gb_23209 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_39595 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os01g53990.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os05g44600.1 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
LOC_Os11g45720.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
LOC_Os11g45730.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
LOC_Os12g37660.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_10428610g0020 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_10434773g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_14449g0010 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
MA_18312g0010 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
MA_304854g0010 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
MA_6149868g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_62865g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_66089g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_87592g0010 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Mp2g01420.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Mp4g01190.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Pp3c10_18650V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Pp3c12_24000V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c18_13190V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Pp3c19_8330V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c1_6010V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Pp3c25_3840V3.1 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
Pp3c3_30560V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c3_32350V3.1 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
Pp3c3_35040V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Pp3c3_35240V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Pp3c5_12770V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c5_12820V3.1 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
Pp3c5_23400V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c8_1440V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c8_1680V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Pp3c8_2010V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Smo81583 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
Solyc07g043240.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc09g091730.4.1 | No alias | pectin methylesterase | 0.01 | Archaeplastida | |
Solyc10g083820.2.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Zm00001e002891_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Zm00001e035522_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001871 | pattern binding | IEP | Neighborhood |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
MF | GO:0004650 | polygalacturonase activity | IEP | Neighborhood |
MF | GO:0004857 | enzyme inhibitor activity | IEP | Neighborhood |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
MF | GO:0008146 | sulfotransferase activity | IEP | Neighborhood |
MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Neighborhood |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
MF | GO:0030234 | enzyme regulator activity | IEP | Neighborhood |
MF | GO:0030246 | carbohydrate binding | IEP | Neighborhood |
MF | GO:0030247 | polysaccharide binding | IEP | Neighborhood |
MF | GO:0098772 | molecular function regulator | IEP | Neighborhood |
MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000070 | Pectinesterase_cat | 45 | 317 |
No external refs found! |