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  5. Solyc01g110180.4.1

Solyc01g110180.4.1


Description : transcription factor (BBX-DBB)


Gene families : OG0000461 (Archaeplastida) Phylogenetic Tree(s): OG0000461_tree ,
OG_05_0000694 (LandPlants) Phylogenetic Tree(s): OG_05_0000694_tree ,
OG_06_0001256 (SeedPlants) Phylogenetic Tree(s): OG_06_0001256_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g110180.4.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT4G38960 No alias B-box type zinc finger family protein 0.04 Archaeplastida
AT4G39070 No alias B-box zinc finger family protein 0.03 Archaeplastida
LOC_Os04g45690.1 No alias transcription factor (BBX-DBB) 0.03 Archaeplastida
Solyc02g084420.3.1 No alias transcription factor (BBX-DBB) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR000315 Znf_B-box 4 34
IPR000315 Znf_B-box 55 93
No external refs found!