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  5. Solyc01g110310.3.1

Solyc01g110310.3.1


Description : transcription factor (GATA)


Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0000055 (LandPlants) Phylogenetic Tree(s): OG_05_0000055_tree ,
OG_06_0000244 (SeedPlants) Phylogenetic Tree(s): OG_06_0000244_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g110310.3.1
Cluster HCCA: Cluster_374

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00242860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AT2G18380 GATA20 GATA transcription factor 20 0.03 Archaeplastida
AT3G45170 GATA14 GATA transcription factor 14 0.06 Archaeplastida
Cpa|evm.model.tig00020610.74 No alias No description available 0.01 Archaeplastida
GSVIVT01016265001 No alias GATA transcription factor 8 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_06864 No alias transcription factor (GATA) 0.02 Archaeplastida
LOC_Os01g54210.1 No alias transcription factor (GATA) 0.02 Archaeplastida
LOC_Os02g56250.1 No alias transcription factor (GATA) 0.04 Archaeplastida
LOC_Os03g05160.1 No alias transcription factor (GATA) 0.04 Archaeplastida
LOC_Os05g44400.1 No alias transcription factor (GATA) 0.02 Archaeplastida
LOC_Os12g07120.1 No alias transcription factor (GATA) 0.02 Archaeplastida
MA_10211121g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_103421g0030 No alias transcription factor (GATA) 0.02 Archaeplastida
MA_120821g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_44185g0010 No alias transcription factor (GATA) 0.02 Archaeplastida
Pp3c18_14800V3.1 No alias cytokinin-responsive gata factor 1 0.03 Archaeplastida
Solyc08g066510.3.1 No alias transcription factor (GATA) 0.03 Archaeplastida
Solyc09g075610.3.1 No alias transcription factor (GATA) 0.07 Archaeplastida
Zm00001e016165_P001 No alias transcription factor (GATA) 0.02 Archaeplastida
Zm00001e023650_P003 No alias transcription factor (GATA) 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000679 Znf_GATA 243 276
No external refs found!