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  5. Solyc01g111050.4.1

Solyc01g111050.4.1


Description : COB cellulose microfibrils and hemicellulose interaction protein


Gene families : OG0000661 (Archaeplastida) Phylogenetic Tree(s): OG0000661_tree ,
OG_05_0012845 (LandPlants) Phylogenetic Tree(s): OG_05_0012845_tree ,
OG_06_0015036 (SeedPlants) Phylogenetic Tree(s): OG_06_0015036_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g111050.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00216570 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 Archaeplastida
LOC_Os03g54750.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
LOC_Os07g41320.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.05 Archaeplastida
MA_4056g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA Interproscan
CC GO:0031225 anchored component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006918 COBRA_pln 45 207
No external refs found!