AT1G01340 (ATCNGC10, CNGC10, ACBK1)

Aliases : ATCNGC10, CNGC10, ACBK1

Description : cyclic nucleotide gated channel 10

Gene families : OG0000137 (Archaeplastida) Phylogenetic Tree(s): OG0000137_tree ,
OG_05_0000296 (LandPlants) Phylogenetic Tree(s): OG_05_0000296_tree ,
OG_06_0000523 (SeedPlants) Phylogenetic Tree(s): OG_06_0000523_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G01340
Cluster	HCCA: Cluster_146

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01023608001	No alias	Solute transport.channels.VIC superfamily.cyclic...	0.03	Archaeplastida
GSVIVT01025208001	No alias	Solute transport.channels.VIC superfamily.cyclic...	0.03	Archaeplastida
GSVIVT01032502001	No alias	Solute transport.channels.VIC superfamily.cyclic...	0.03	Archaeplastida
LOC_Os03g55100.1	No alias	cyclic nucleotide-gated cation channel (CNGC)....	0.03	Archaeplastida
LOC_Os06g33570.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
Pp3c13_22730V3.1	No alias	cyclic nucleotide gated channel 5	0.03	Archaeplastida
Smo113786	No alias	Solute transport.channels.VIC superfamily.cyclic...	0.02	Archaeplastida
Smo84488	No alias	Solute transport.channels.VIC superfamily.cyclic...	0.02	Archaeplastida
Solyc07g005590.3.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
Solyc07g006510.3.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
Zm00001e006772_P003	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005516	calmodulin binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030551	cyclic nucleotide binding	ISS	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
BP	GO:0002376	immune system process	IEP	Neighborhood
BP	GO:0002790	peptide secretion	IEP	Neighborhood
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0004028	3-chloroallyl aldehyde dehydrogenase activity	IEP	Neighborhood
MF	GO:0004029	aldehyde dehydrogenase (NAD) activity	IEP	Neighborhood
MF	GO:0004030	aldehyde dehydrogenase [NAD(P)+] activity	IEP	Neighborhood
CC	GO:0005773	vacuole	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0005992	trehalose biosynthetic process	IEP	Neighborhood
BP	GO:0006560	proline metabolic process	IEP	Neighborhood
BP	GO:0006561	proline biosynthetic process	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006928	movement of cell or subcellular component	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
BP	GO:0006955	immune response	IEP	Neighborhood
BP	GO:0006972	hyperosmotic response	IEP	Neighborhood
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009306	protein secretion	IEP	Neighborhood
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0009403	toxin biosynthetic process	IEP	Neighborhood
BP	GO:0009607	response to biotic stimulus	IEP	Neighborhood
BP	GO:0009627	systemic acquired resistance	IEP	Neighborhood
BP	GO:0009700	indole phytoalexin biosynthetic process	IEP	Neighborhood
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0009814	defense response, incompatible interaction	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
BP	GO:0010120	camalexin biosynthetic process	IEP	Neighborhood
BP	GO:0010150	leaf senescence	IEP	Neighborhood
BP	GO:0010167	response to nitrate	IEP	Neighborhood
BP	GO:0010200	response to chitin	IEP	Neighborhood
BP	GO:0010243	response to organonitrogen compound	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
BP	GO:0015706	nitrate transport	IEP	Neighborhood
CC	GO:0016459	myosin complex	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Neighborhood
BP	GO:0019748	secondary metabolic process	IEP	Neighborhood
CC	GO:0019898	extrinsic component of membrane	IEP	Neighborhood
BP	GO:0030048	actin filament-based movement	IEP	Neighborhood
BP	GO:0032940	secretion by cell	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
BP	GO:0042493	response to drug	IEP	Neighborhood
BP	GO:0042538	hyperosmotic salinity response	IEP	Neighborhood
BP	GO:0043207	response to external biotic stimulus	IEP	Neighborhood
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Neighborhood
BP	GO:0045087	innate immune response	IEP	Neighborhood
BP	GO:0046217	indole phytoalexin metabolic process	IEP	Neighborhood
BP	GO:0046283	anthocyanin-containing compound metabolic process	IEP	Neighborhood
BP	GO:0046351	disaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0046903	secretion	IEP	Neighborhood
MF	GO:0050269	coniferyl-aldehyde dehydrogenase activity	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0051704	multi-organism process	IEP	Neighborhood
BP	GO:0051707	response to other organism	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
BP	GO:0052314	phytoalexin metabolic process	IEP	Neighborhood
BP	GO:0052315	phytoalexin biosynthetic process	IEP	Neighborhood
BP	GO:0052317	camalexin metabolic process	IEP	Neighborhood
BP	GO:0090693	plant organ senescence	IEP	Neighborhood
BP	GO:0098542	defense response to other organism	IEP	Neighborhood
BP	GO:1900055	regulation of leaf senescence	IEP	Neighborhood
BP	GO:1900056	negative regulation of leaf senescence	IEP	Neighborhood
BP	GO:1901698	response to nitrogen compound	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood
BP	GO:1905622	negative regulation of leaf development	IEP	Neighborhood
BP	GO:2000024	regulation of leaf development	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	72	396
IPR000595	cNMP-bd_dom	488	583

External Links

No external refs found!

AT1G01340 (ATCNGC10, CNGC10, ACBK1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation