Solyc01g111450.3.1


Description : component alpha type-4 of 26S proteasome


Gene families : OG0003804 (Archaeplastida) Phylogenetic Tree(s): OG0003804_tree ,
OG_05_0004062 (LandPlants) Phylogenetic Tree(s): OG_05_0004062_tree ,
OG_06_0005299 (SeedPlants) Phylogenetic Tree(s): OG_06_0005299_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g111450.3.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00097510 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.05 Archaeplastida
AT3G51260 PAD1 20S proteasome alpha subunit PAD1 0.22 Archaeplastida
Cpa|evm.model.tig00020830.84 No alias Protein degradation.26S proteasome.20S core... 0.07 Archaeplastida
Cre01.g030850 No alias Protein degradation.26S proteasome.20S core... 0.21 Archaeplastida
GSVIVT01024037001 No alias Protein degradation.26S proteasome.20S core... 0.05 Archaeplastida
Gb_06267 No alias component alpha type-4 of 26S proteasome 0.06 Archaeplastida
LOC_Os08g43540.1 No alias component alpha type-4 of 26S proteasome 0.05 Archaeplastida
LOC_Os09g36710.1 No alias component alpha type-4 of 26S proteasome 0.07 Archaeplastida
MA_10436167g0010 No alias component alpha type-4 of 26S proteasome 0.11 Archaeplastida
Mp6g07820.1 No alias component alpha type-4 of 26S proteasome 0.1 Archaeplastida
Pp3c18_9650V3.1 No alias proteasome alpha subunit D2 0.08 Archaeplastida
Pp3c19_7610V3.1 No alias proteasome alpha subunit D2 0.03 Archaeplastida
Pp3c21_8390V3.1 No alias proteasome alpha subunit D2 0.05 Archaeplastida
Zm00001e010250_P002 No alias component alpha type-4 of 26S proteasome 0.05 Archaeplastida
Zm00001e035996_P001 No alias component alpha type-4 of 26S proteasome 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0030150 protein import into mitochondrial matrix IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Neighborhood
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0065002 intracellular protein transmembrane transport IEP Neighborhood
BP GO:0070585 protein localization to mitochondrion IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071806 protein transmembrane transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072655 establishment of protein localization to mitochondrion IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 4 26
IPR001353 Proteasome_sua/b 27 210
No external refs found!