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  5. Solyc01g111660.4.1

Solyc01g111660.4.1


Description : plasma membrane intrinsic protein (PIP)


Gene families : OG0000026 (Archaeplastida) Phylogenetic Tree(s): OG0000026_tree ,
OG_05_0000534 (LandPlants) Phylogenetic Tree(s): OG_05_0000534_tree ,
OG_06_0000369 (SeedPlants) Phylogenetic Tree(s): OG_06_0000369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g111660.4.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT1G01620 PIP1C, TMP-B, PIP1;3 plasma membrane intrinsic protein 1C 0.03 Archaeplastida
AT2G25810 TIP4;1 tonoplast intrinsic protein 4;1 0.02 Archaeplastida
AT2G45960 PIP1B, ATHH2,... plasma membrane intrinsic protein 1B 0.05 Archaeplastida
AT3G16240 ATTIP2;1,... delta tonoplast integral protein 0.04 Archaeplastida
AT4G17340 DELTA-TIP2, TIP2;2 tonoplast intrinsic protein 2;2 0.05 Archaeplastida
AT4G19030 AT-NLM1, ATNLM1,... NOD26-like major intrinsic protein 1 0.02 Archaeplastida
AT5G37820 NIP4;2, NLM5 NOD26-like intrinsic protein 4;2 0.03 Archaeplastida
GSVIVT01018189001 No alias Solute transport.channels.MIP family.tonoplast intrinsic... 0.02 Archaeplastida
GSVIVT01018678001 No alias Solute transport.channels.MIP family.tonoplast intrinsic... 0.02 Archaeplastida
GSVIVT01026944001 No alias Solute transport.channels.MIP family.plasma membrane... 0.04 Archaeplastida
GSVIVT01033677001 No alias Solute transport.channels.MIP family.tonoplast intrinsic... 0.06 Archaeplastida
Gb_17413 No alias plasma membrane intrinsic protein (PIP) 0.05 Archaeplastida
Gb_26584 No alias tonoplast intrinsic protein (TIP) 0.03 Archaeplastida
LOC_Os02g41860.1 No alias plasma membrane intrinsic protein (PIP) 0.06 Archaeplastida
LOC_Os02g44630.1 No alias plasma membrane intrinsic protein (PIP) 0.08 Archaeplastida
LOC_Os03g64330.1 No alias plasma membrane intrinsic protein (PIP) 0.04 Archaeplastida
LOC_Os04g16450.1 No alias plasma membrane intrinsic protein (PIP) 0.03 Archaeplastida
LOC_Os04g47220.1 No alias plasma membrane intrinsic protein (PIP) 0.03 Archaeplastida
Smo165030 No alias Solute transport.channels.MIP family.tonoplast intrinsic... 0.04 Archaeplastida
Smo173700 No alias Solute transport.channels.MIP family.Nodulin-26-like... 0.05 Archaeplastida
Smo98603 No alias Solute transport.channels.MIP family.plasma membrane... 0.03 Archaeplastida
Solyc02g083510.3.1 No alias plasma membrane intrinsic protein (PIP) 0.05 Archaeplastida
Solyc06g074820.3.1 No alias tonoplast intrinsic protein (TIP) 0.09 Archaeplastida
Solyc12g044330.2.1 No alias tonoplast intrinsic protein (TIP) 0.05 Archaeplastida
Zm00001e009547_P001 No alias plasma membrane intrinsic protein (PIP) 0.03 Archaeplastida
Zm00001e016388_P002 No alias tonoplast intrinsic protein (TIP) 0.06 Archaeplastida
Zm00001e023039_P001 No alias plasma membrane intrinsic protein (PIP) 0.03 Archaeplastida
Zm00001e033411_P002 No alias plasma membrane intrinsic protein (PIP) 0.04 Archaeplastida
Zm00001e039086_P002 No alias tonoplast intrinsic protein (TIP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000425 MIP 32 262
No external refs found!