1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g112200.3.1

Solyc01g112200.3.1


Description : Pentatricopeptide repeat-containing protein At2g17210 OS=Arabidopsis thaliana (sp|q9sii7|pp159_arath : 663.0)


Gene families : OG0021053 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0020757 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0000000 (SeedPlants) Phylogenetic Tree(s): OG_06_0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g112200.3.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AT2G17210 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 82 107
IPR002885 Pentatricopeptide_repeat 385 410
IPR002885 Pentatricopeptide_repeat 586 609
IPR002885 Pentatricopeptide_repeat 411 457
IPR002885 Pentatricopeptide_repeat 511 559
IPR002885 Pentatricopeptide_repeat 309 357
No external refs found!