Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.180
Description : DNA mismatch repair protein MSH7 OS=Arabidopsis thaliana
Gene families : OG0001515 (Archaeplastida) Phylogenetic Tree(s): OG0001515_tree ,
OG_05_0006412 (LandPlants) Phylogenetic Tree(s): OG_05_0006412_tree ,
OG_06_0007207 (SeedPlants) Phylogenetic Tree(s): OG_06_0007207_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00022p00172100 | |
Cluster | HCCA: Cluster_96 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G24495 | MSH7, ATMSH7, MSH6-2 | MUTS homolog 7 | 0.03 | Archaeplastida | |
Cpa|evm.model.tig00000489.16 | No alias | DNA mismatch repair protein MSH6 OS=Arabidopsis thaliana | 0.01 | Archaeplastida | |
Cre05.g235750 | No alias | DNA mismatch repair protein MSH6 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
GSVIVT01015407001 | No alias | DNA damage response.DNA repair mechanisms.mismatch... | 0.04 | Archaeplastida | |
LOC_Os09g24220.1 | No alias | component MSH6 of MSH2-x mismatch repair heterodimers | 0.02 | Archaeplastida | |
Solyc01g079520.3.1 | No alias | component MSH6 of MSH2-x mismatch repair heterodimers | 0.07 | Archaeplastida | |
Zm00001e016678_P004 | No alias | component MSH7 of MSH2-x mismatch repair heterodimers | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006298 | mismatch repair | IEA | Interproscan |
MF | GO:0030983 | mismatched DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
No external refs found! |