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  5. Solyc02g005000.1.1

Solyc02g005000.1.1


Description : no hits & (original description: none)


Gene families : OG0000242 (Archaeplastida) Phylogenetic Tree(s): OG0000242_tree ,
OG_05_0002311 (LandPlants) Phylogenetic Tree(s): OG_05_0002311_tree ,
OG_06_0001644 (SeedPlants) Phylogenetic Tree(s): OG_06_0001644_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g005000.1.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Gb_30872 No alias deubiquitinase (UBP23) 0.02 Archaeplastida
LOC_Os09g28940.1 No alias deubiquitinase (UBP15-21) 0.04 Archaeplastida
Pp3c13_23560V3.1 No alias ubiquitin-specific protease 25 0.02 Archaeplastida
Pp3c21_10760V3.1 No alias ubiquitin-specific protease 23 0.02 Archaeplastida
Solyc10g047480.1.1 No alias Ubiquitin carboxyl-terminal hydrolase 20 OS=Arabidopsis... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004529 exodeoxyribonuclease activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Neighborhood
MF GO:0008409 5'-3' exonuclease activity IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!