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  5. Solyc02g005210.3.1

Solyc02g005210.3.1


Description : assembly factor CCB1 of CCB cytochrome b6 maturation system (system IV)


Gene families : OG0005549 (Archaeplastida) Phylogenetic Tree(s): OG0005549_tree ,
OG_05_0008281 (LandPlants) Phylogenetic Tree(s): OG_05_0008281_tree ,
OG_06_0009846 (SeedPlants) Phylogenetic Tree(s): OG_06_0009846_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g005210.3.1
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00074040 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 Archaeplastida
AT3G26710 CCB1 cofactor assembly of complex C 0.03 Archaeplastida
Cre16.g662150 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 Archaeplastida
GSVIVT01032980001 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 Archaeplastida
MA_10429833g0010 No alias assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 Archaeplastida
Mp4g15480.1 No alias assembly factor CCB1 of CCB cytochrome b6 maturation... 0.08 Archaeplastida
Smo99402 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR021919 CCB1 76 244
No external refs found!