Solyc02g005600.1.1

Description : Ubiquitin carboxyl-terminal hydrolase 20 OS=Arabidopsis thaliana (sp|q9fps7|ubp20_arath : 234.0)

Gene families : OG0000242 (Archaeplastida) Phylogenetic Tree(s): OG0000242_tree ,
OG_05_0002311 (LandPlants) Phylogenetic Tree(s): OG_05_0002311_tree ,
OG_06_0001644 (SeedPlants) Phylogenetic Tree(s): OG_06_0001644_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g005600.1.1
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
AT5G65450	UBP17	ubiquitin-specific protease 17	0.03	Archaeplastida
GSVIVT01009158001	No alias	Protein degradation.peptidase families.cysteine-type...	0.03	Archaeplastida
LOC_Os09g28940.1	No alias	deubiquitinase (UBP15-21)	0.03	Archaeplastida
MA_127745g0010	No alias	Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis...	0.03	Archaeplastida
Pp3c13_23560V3.1	No alias	ubiquitin-specific protease 25	0.02	Archaeplastida
Pp3c5_25690V3.1	No alias	ubiquitin-specific protease 18	0.02	Archaeplastida
Solyc10g047480.1.1	No alias	Ubiquitin carboxyl-terminal hydrolase 20 OS=Arabidopsis...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein-specific protease activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	ubiquitinyl hydrolase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0005985	sucrose metabolic process	IEP	Neighborhood
MF	GO:0016157	sucrose synthase activity	IEP	Neighborhood
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Neighborhood
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	Neighborhood
CC	GO:0030131	clathrin adaptor complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	200	412

External Links

No external refs found!

Solyc02g005600.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation