Description : Ubiquitin carboxyl-terminal hydrolase 20 OS=Arabidopsis thaliana (sp|q9fps7|ubp20_arath : 234.0)

Gene families : OG0000242 (Archaeplastida) Phylogenetic Tree(s): OG0000242_tree ,
OG_05_0002311 (LandPlants) Phylogenetic Tree(s): OG_05_0002311_tree ,
OG_06_0001644 (SeedPlants) Phylogenetic Tree(s): OG_06_0001644_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Solyc02g005600.1.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT5G65450 UBP17 ubiquitin-specific protease 17 0.03 Archaeplastida
GSVIVT01009158001 No alias Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
LOC_Os09g28940.1 No alias deubiquitinase (UBP15-21) 0.03 Archaeplastida
MA_127745g0010 No alias Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c13_23560V3.1 No alias ubiquitin-specific protease 25 0.02 Archaeplastida
Pp3c5_25690V3.1 No alias ubiquitin-specific protease 18 0.02 Archaeplastida
Solyc10g047480.1.1 No alias Ubiquitin carboxyl-terminal hydrolase 20 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0005985 sucrose metabolic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 200 412
No external refs found!