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  5. Solyc02g005608.1.1

Solyc02g005608.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 110.0)


Gene families : OG0000100 (Archaeplastida) Phylogenetic Tree(s): OG0000100_tree ,
OG_05_0000036 (LandPlants) Phylogenetic Tree(s): OG_05_0000036_tree ,
OG_06_0000011 (SeedPlants) Phylogenetic Tree(s): OG_06_0000011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g005608.1.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Solyc01g057523.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.03 Archaeplastida
Solyc01g058685.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc04g050955.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc07g017605.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc07g040905.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.01 Archaeplastida
Solyc07g061865.1.1 No alias No annotation 0.01 Archaeplastida
Solyc08g041825.1.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Solyc08g042065.1.1 No alias No annotation 0.01 Archaeplastida
Solyc08g043143.1.1 No alias No annotation 0.05 Archaeplastida
Solyc08g066495.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g059105.1.1 No alias No annotation 0.07 Archaeplastida
Solyc09g059157.1.1 No alias No annotation 0.09 Archaeplastida
Solyc09g059748.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc10g017725.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc10g024387.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.01 Archaeplastida
Solyc11g020847.1.1 No alias No annotation 0.01 Archaeplastida
Solyc12g040817.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!