AMTR_s00022p00182240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.193

Description : Solute transport.porins.OEP40 outer membrane porin


Gene families : OG0004091 (Archaeplastida) Phylogenetic Tree(s): OG0004091_tree ,
OG_05_0003144 (LandPlants) Phylogenetic Tree(s): OG_05_0003144_tree ,
OG_06_0003404 (SeedPlants) Phylogenetic Tree(s): OG_06_0003404_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00182240
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00044790 evm_27.TU.AmTr_v1... Solute transport.porins.OEP40 outer membrane porin 0.06 Archaeplastida
LOC_Os08g39990.1 No alias outer membrane porin (OEP40) 0.03 Archaeplastida
LOC_Os09g31458.1 No alias outer membrane porin (OEP40) 0.02 Archaeplastida
Pp3c26_2720V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c4_23000V3.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000910 cytokinesis IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!