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  5. Solyc02g032480.3.1

Solyc02g032480.3.1


Description : cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of nuclear pore complex


Gene families : OG0005699 (Archaeplastida) Phylogenetic Tree(s): OG0005699_tree ,
OG_05_0005057 (LandPlants) Phylogenetic Tree(s): OG_05_0005057_tree ,
OG_06_0004420 (SeedPlants) Phylogenetic Tree(s): OG_06_0004420_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g032480.3.1
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00078800 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
Cre07.g313500 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
MA_10435938g0010 No alias no hits & (original description: none) 0.13 Archaeplastida
MA_31606g0010 No alias cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.03 Archaeplastida
MA_903935g0010 No alias Nuclear pore complex protein NUP214 OS=Arabidopsis... 0.12 Archaeplastida
Mp3g04100.1 No alias cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.04 Archaeplastida
Pp3c13_12950V3.1 No alias Nuclear pore complex protein 0.02 Archaeplastida
Zm00001e035895_P006 No alias cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!