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  5. Solyc02g036260.4.1

Solyc02g036260.4.1


Description : calcium-permeable channel (OSCA)


Gene families : OG0000175 (Archaeplastida) Phylogenetic Tree(s): OG0000175_tree ,
OG_05_0001075 (LandPlants) Phylogenetic Tree(s): OG_05_0001075_tree ,
OG_06_0000936 (SeedPlants) Phylogenetic Tree(s): OG_06_0000936_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g036260.4.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00102970 evm_27.TU.AmTr_v1... Solute transport.channels.OSCA calcium-permeable channel 0.02 Archaeplastida
AMTR_s00048p00143150 evm_27.TU.AmTr_v1... Solute transport.channels.OSCA calcium-permeable channel 0.06 Archaeplastida
AT1G11960 No alias ERD (early-responsive to dehydration stress) family protein 0.02 Archaeplastida
AT1G32090 No alias early-responsive to dehydration stress protein (ERD4) 0.03 Archaeplastida
AT4G15430 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Archaeplastida
Gb_08555 No alias calcium-permeable channel (OSCA) 0.04 Archaeplastida
Gb_08556 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
Gb_24188 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
LOC_Os01g35050.3 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
LOC_Os12g39320.1 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
MA_10431698g0010 No alias calcium-permeable channel (OSCA) 0.04 Archaeplastida
MA_10551g0010 No alias Protein OSCA1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Pp3c17_22430V3.1 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 Archaeplastida
Pp3c9_16680V3.1 No alias hypothetical protein 1 0.02 Archaeplastida
Smo91711 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 Archaeplastida
Solyc07g048110.4.1 No alias calcium-permeable channel (OSCA) 0.04 Archaeplastida
Zm00001e012117_P001 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
Zm00001e020766_P002 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR027815 PHM7_cyt 116 277
IPR003864 RSN1_7TM 288 560
IPR032880 Csc1_N 1 95
No external refs found!