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  5. Solyc02g036320.2.1

Solyc02g036320.2.1


Description : Photosystem I P700 chlorophyll a apoprotein A2 OS=Zea mays (sp|p04967|psab_maize : 102.0)


Gene families : OG0000489 (Archaeplastida) Phylogenetic Tree(s): OG0000489_tree ,
OG_05_0000306 (LandPlants) Phylogenetic Tree(s): OG_05_0000306_tree ,
OG_06_0012444 (SeedPlants) Phylogenetic Tree(s): OG_06_0012444_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g036320.2.1
Cluster HCCA: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00250910 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.02 Archaeplastida
AMTR_s00063p00185460 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.02 Archaeplastida
AMTR_s00076p00111250 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.02 Archaeplastida
AMTR_s00334p00015340 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.02 Archaeplastida
AMTR_s01196p00002960 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Morus indica 0.02 Archaeplastida
ATCG00340 PSAB Photosystem I, PsaA/PsaB protein 0.02 Archaeplastida
ATCG00350 PSAA Photosystem I, PsaA/PsaB protein 0.02 Archaeplastida
LOC_Os04g16760.1 No alias apoprotein PsaA of PS-I complex 0.03 Archaeplastida
LOC_Os05g01675.1 No alias apoprotein PsaA of PS-I complex 0.03 Archaeplastida
Solyc01g017230.2.1 No alias NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic... 0.04 Archaeplastida
Solyc09g015290.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A1 OS=Coffea... 0.04 Archaeplastida
Solyc12g032970.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Atropa... 0.04 Archaeplastida
Solyc12g035740.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Atropa... 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009579 thylakoid IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 2 54
No external refs found!