Solyc02g061780.3.1

Description : transcription factor (NAC)

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000038 (LandPlants) Phylogenetic Tree(s): OG_05_0000038_tree ,
OG_06_0000864 (SeedPlants) Phylogenetic Tree(s): OG_06_0000864_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g061780.3.1
Cluster	HCCA: Cluster_103

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00252470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.01	Archaeplastida
AMTR_s00010p00260100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.06	Archaeplastida
AMTR_s00044p00058470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00119p00040230	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.01	Archaeplastida
AMTR_s00119p00045570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.01	Archaeplastida
AT1G12260	EMB2749,...	NAC 007	0.01	Archaeplastida
AT1G33280	BRN1, ANAC015, NAC015	NAC domain containing protein 15	0.01	Archaeplastida
AT1G62700	VND5, ANAC026	Arabidopsis NAC domain containing protein 26	0.01	Archaeplastida
AT1G71930	ANAC030, VND7	vascular related NAC-domain protein 7	0.01	Archaeplastida
AT3G04060	anac046, NAC046	NAC domain containing protein 46	0.02	Archaeplastida
AT3G04070	anac047, NAC047	NAC domain containing protein 47	0.01	Archaeplastida
AT3G15170	ANAC054, ATNAC1, CUC1	NAC (No Apical Meristem) domain transcriptional...	0.04	Archaeplastida
AT4G36160	VND2, NAC076, ANAC076	NAC domain containing protein 76	0.01	Archaeplastida
GSVIVT01007982001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.01	Archaeplastida
GSVIVT01008291001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01023921001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.01	Archaeplastida
GSVIVT01027431001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.01	Archaeplastida
GSVIVT01035554001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
LOC_Os01g66120.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
LOC_Os03g21030.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
LOC_Os05g34830.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
LOC_Os07g37920.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_264971g0010	No alias	transcription factor (NAC)	0.01	Archaeplastida
Pp3c13_10800V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.01	Archaeplastida
Pp3c27_7430V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.01	Archaeplastida
Solyc01g102740.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc04g005610.3.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
Solyc05g021090.4.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc07g045030.4.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc07g066330.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc10g055760.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc11g018660.2.1	No alias	transcription factor (NAC)	0.07	Archaeplastida
Zm00001e003559_P003	No alias	transcription factor (NAC)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009733	response to auxin	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	9	135

External Links

No external refs found!

Solyc02g061780.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation