Solyc02g061840.3.1

Description : Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana (sp|q84th4|sr45a_arath : 107.0)

Gene families : OG0001100 (Archaeplastida) Phylogenetic Tree(s): OG0001100_tree ,
OG_05_0001443 (LandPlants) Phylogenetic Tree(s): OG_05_0001443_tree ,
OG_06_0001574 (SeedPlants) Phylogenetic Tree(s): OG_06_0001574_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g061840.3.1
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020553.146	No alias	Serine/arginine-rich splicing factor SR45a...	0.01	Archaeplastida
Gb_39431	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e013302_P002	No alias	Serine/arginine-rich splicing factor SR45a...	0.03	Archaeplastida
Zm00001e022330_P003	No alias	Serine/arginine-rich splicing factor SR45a...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0004371	glycerone kinase activity	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
BP	GO:0006066	alcohol metabolic process	IEP	Neighborhood
BP	GO:0006071	glycerol metabolic process	IEP	Neighborhood
BP	GO:0006397	mRNA processing	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
BP	GO:0019400	alditol metabolic process	IEP	Neighborhood
BP	GO:0019751	polyol metabolic process	IEP	Neighborhood
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	63	132

External Links

No external refs found!