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  5. Solyc02g061980.3.1

Solyc02g061980.3.1


Description : La-related protein 1C OS=Arabidopsis thaliana (sp|q94k80|lrp1c_arath : 144.0)


Gene families : OG0001423 (Archaeplastida) Phylogenetic Tree(s): OG0001423_tree ,
OG_05_0001373 (LandPlants) Phylogenetic Tree(s): OG_05_0001373_tree ,
OG_06_0005625 (SeedPlants) Phylogenetic Tree(s): OG_06_0005625_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g061980.3.1
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
AT4G35890 No alias winged-helix DNA-binding transcription factor family protein 0.04 Archaeplastida
GSVIVT01006333001 No alias La-related protein 1C OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_04152 No alias La-related protein 1C OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_113816g0010 No alias La-related protein 1A OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_114481g0010 No alias La-related protein 1B OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_1763g0010 No alias La-related protein 1A OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c11_24960V3.1 No alias LA RNA-binding protein 0.04 Archaeplastida
Pp3c7_8450V3.1 No alias LA RNA-binding protein 0.02 Archaeplastida
Zm00001e010261_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e025537_P001 No alias XRN4-exoribonuclease cofactor (LARP1) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008318 protein prenyltransferase activity IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0018342 protein prenylation IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0097354 prenylation IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006630 La_HTH 358 413
No external refs found!