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  5. Solyc02g062050.3.1

Solyc02g062050.3.1


Description : Senescence/dehydration-associated protein At4g35985, chloroplastic OS=Arabidopsis thaliana (sp|f4jnx2|sdeh4_arath : 92.4)


Gene families : OG0000668 (Archaeplastida) Phylogenetic Tree(s): OG0000668_tree ,
OG_05_0107623 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0085353 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g062050.3.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT3G21600 No alias Senescence/dehydration-associated protein-related 0.03 Archaeplastida
LOC_Os01g52480.1 No alias Senescence/dehydration-associated protein At4g35985,... 0.04 Archaeplastida
MA_114968g0010 No alias Senescence/dehydration-associated protein At3g51250... 0.02 Archaeplastida
Pp3c22_6990V3.1 No alias Senescence/dehydration-associated protein-related 0.02 Archaeplastida
Smo77517 No alias Senescence/dehydration-associated protein At4g35985,... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR009686 Senescence/spartin 13 63
No external refs found!