Description : component CBP20 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)
Gene families : OG0006350 (Archaeplastida) Phylogenetic Tree(s): OG0006350_tree ,
OG_05_0007807 (LandPlants) Phylogenetic Tree(s): OG_05_0007807_tree ,
OG_06_0008844 (SeedPlants) Phylogenetic Tree(s): OG_06_0008844_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc02g062620.3.1 | |
Cluster | HCCA: Cluster_131 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00021682.8 | No alias | Nuclear cap-binding protein subunit 2 OS=Oryza sativa... | 0.03 | Archaeplastida | |
Cre10.g437850 | No alias | RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... | 0.02 | Archaeplastida | |
LOC_Os02g39890.1 | No alias | component CBP20 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) | 0.04 | Archaeplastida | |
Zm00001e022959_P002 | No alias | Nuclear cap-binding protein subunit 2 OS=Oryza sativa... | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Neighborhood |
MF | GO:0003684 | damaged DNA binding | IEP | Neighborhood |
MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Neighborhood |
CC | GO:0005839 | proteasome core complex | IEP | Neighborhood |
BP | GO:0006289 | nucleotide-excision repair | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0009056 | catabolic process | IEP | Neighborhood |
BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0010498 | proteasomal protein catabolic process | IEP | Neighborhood |
BP | GO:0018208 | peptidyl-proline modification | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Neighborhood |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Neighborhood |
BP | GO:0030163 | protein catabolic process | IEP | Neighborhood |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Neighborhood |
BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 36 | 106 |
No external refs found! |