Solyc02g062670.3.1


Description : transcription factor (TUB)


Gene families : OG0000335 (Archaeplastida) Phylogenetic Tree(s): OG0000335_tree ,
OG_05_0000295 (LandPlants) Phylogenetic Tree(s): OG_05_0000295_tree ,
OG_06_0000341 (SeedPlants) Phylogenetic Tree(s): OG_06_0000341_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g062670.3.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001049.14 No alias RNA biosynthesis.transcriptional activation.TUB... 0.01 Archaeplastida
GSVIVT01018940001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.04 Archaeplastida
MA_18086g0010 No alias transcription factor (TUB) 0.03 Archaeplastida
Zm00001e031774_P001 No alias transcription factor (TUB) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 58 110
IPR000007 Tubby_C 121 411
No external refs found!