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  5. Solyc02g064670.1.1

Solyc02g064670.1.1


Description : component RPL26 of LSU proteome component


Gene families : OG0002117 (Archaeplastida) Phylogenetic Tree(s): OG0002117_tree ,
OG_05_0002108 (LandPlants) Phylogenetic Tree(s): OG_05_0002108_tree ,
OG_06_0002767 (SeedPlants) Phylogenetic Tree(s): OG_06_0002767_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g064670.1.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00214810 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
AMTR_s00065p00088770 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
AT3G49910 No alias Translation protein SH3-like family protein 0.22 Archaeplastida
AT5G67510 No alias Translation protein SH3-like family protein 0.16 Archaeplastida
Cpa|evm.model.tig00000144.60 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
Cre01.g040000 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 Archaeplastida
GSVIVT01030972001 No alias 60S ribosomal protein L26-1 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_05675 No alias component RPL26 of LSU proteome component 0.13 Archaeplastida
Gb_06102 No alias component RPL26 of LSU proteome component 0.15 Archaeplastida
LOC_Os01g04730.1 No alias component RPL26 of LSU proteome component 0.04 Archaeplastida
LOC_Os11g05370.1 No alias component RPL26 of LSU proteome component 0.15 Archaeplastida
LOC_Os12g05430.1 No alias component RPL26 of LSU proteome component 0.15 Archaeplastida
MA_13141g0010 No alias component RPL26 of LSU proteome component 0.18 Archaeplastida
MA_158811g0010 No alias component RPL26 of LSU proteome component 0.12 Archaeplastida
MA_162587g0010 No alias component RPL26 of LSU proteome component 0.03 Archaeplastida
Mp2g12870.1 No alias component RPL26 of LSU proteome component 0.16 Archaeplastida
Pp3c10_11120V3.1 No alias Translation protein SH3-like family protein 0.17 Archaeplastida
Pp3c14_25170V3.1 No alias Translation protein SH3-like family protein 0.23 Archaeplastida
Pp3c1_25000V3.1 No alias Translation protein SH3-like family protein 0.2 Archaeplastida
Pp3c2_15910V3.1 No alias Translation protein SH3-like family protein 0.19 Archaeplastida
Pp3c4_17780V3.1 No alias Translation protein SH3-like family protein 0.15 Archaeplastida
Smo227399 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
Zm00001e016957_P001 No alias component RPL26 of LSU proteome component 0.05 Archaeplastida
Zm00001e025774_P001 No alias component RPL26 of LSU proteome component 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0035145 exon-exon junction complex IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR005824 KOW 51 82
IPR005756 Ribosomal_L26/L24P_euk/arc 8 121
No external refs found!